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The Advanced Single Cell OMICs facility is pleased to offer training on various spatial transcriptomic platforms.

Upcoming Training opportunities:

Dates In Person / Online / Hybrid Course Details Registration
1st to 3rd April 2025 In Person  Spatial Transcriptomics in Tissues - This course will cover the full workflow to analyse spatial gene expression in the tissue context using the Visium HD and CytAssist platforms. 

Places will be filled from the facility's waiting list. 

Please contact maria.greco@imm.ox.ac.uk for more information.

29th – 30thApril 2025 In Person RNA Bulk Library Preparation - This course provides a unique opportunity to learn essential techniques, including:
  • Performing size selection and double-sided size selection
  • Using library QC platforms to assess sample quality
  • Identifying good traces and troubleshooting poor sample quality

Requirements: Participants will gain practical experience by preparing their own libraries using the NEBNext UltraExpress RNA Library Prep Kit. To take part, you will need to provide 4-6 isolated RNA samples, which will be assessed for quality before the training begins. No previous experience with library preparation is required.

There are 6 places available on this workshop, which will be allocated on a first-come basis.

Please contact maria.greco@imm.ox.ac.uk to register or for more information.

Please note: This training comes with an associated cost.

 

If you would like to hear about upcoming training opportunities, please fill out our expression of interest form: https://forms.office.com/e/Uty0vuetPT

 

Past Courses

Course Dates

Spatial Transcriptomics in Tissues 

This course covered the full workflow to analyse spatial gene expression in the tissue context using the Visium HD and CytAssist platforms. 

November 2024

September 2024

10x Xenium Training - From Panel Design & Tissue Preparation to Imaging & Data Analysis

This course included talks and practical sessions to cover the entire experimental workflow for the 10x Xenium platform. This technology allows interrogation of the co-expression of thousands of RNA molecules in cells in their native tissue position. 

May 2024