Recent publications published by researchers at the MRC WIMM.
REnformer, a single-cell ATAC-seq predicting model to investigate open chromatin sites
Riva SG. et al, (2025)
Active regulatory elements recruit cohesin to establish cell specific chromatin domains.
Georgiades E. et al, (2025), Sci Rep, 15
Constructing a Computational Workflow for the Identification of Novel Cellular and Molecular Drivers of Human Granulopoiesis
Riva SG. et al, (2024), BLOOD, 144, 2525 - 2526
KLF5 Is a Key Regulator of IMiD-Induced Neutropenia
Karali CS. et al, (2024), BLOOD, 144, 2527 - 2528
Transcriptional regulation of genes throughout the cell cycle
Herrmann J. et al, (2024), EUROPEAN JOURNAL OF HUMAN GENETICS, 32, 1754 - 1754
Transcriptional regulation of genes throughout the cell cycle
Herrmann J. et al, (2024), EUROPEAN JOURNAL OF HUMAN GENETICS, 32, 1754 - 1754
Structural and non-coding variants increase the diagnostic yield of clinical whole genome sequencing for rare diseases.
Pagnamenta AT. et al, (2023), Genome Med, 15
MAGNETO: Cell type marker panel generator from single-cell transcriptomic data.
Tangherloni A. et al, (2023), J Biomed Inform, 147
CATCH-UP: A High-Throughput Upstream-Pipeline for Bulk ATAC-Seq and ChIP-Seq Data.
Riva SG. et al, (2023), J Vis Exp
MLL-AF4 cooperates with PAF1 and FACT to drive high-density enhancer interactions in leukemia.
Crump NT. et al, (2023), Nat Commun, 14
GTAC enables parallel genotyping of multiple genomic loci with chromatin accessibility profiling in single cells.
Turkalj S. et al, (2023), Cell Stem Cell, 30, 722 - 740.e11
A Multiomic Single-Cell Atlas of Human Myelopoiesis Reveals Cellular and Molecular Drivers of Immunomodulatory Drug-Induced Neutropenia
Karali CS. et al, (2023), BLOOD, 142
Active regulatory elements recruit cohesin to establish cell-specific chromatin domains
Georgiades E. et al, (2023)
Consensus Clustering Strategy for Cell Type Assignments of scRNA-seq Data
Riva SG. et al, (2023), CIBCB 2023 - 20th IEEE Conference on Computational Intelligence in Bioinformatics and Computational Biology
COVID-19 BEDS OCCUPANCY AND HOSPITAL COMPLAINTS: A PREDICTIVE MODEL
Foglia E. et al, (2022), VALUE IN HEALTH, 25, S356 - S356
IRX3 Oncogene Activation in T-ALL through Enhancer Hijacking Caused By fto Intron 8 Deletions
Rahman S. et al, (2022), BLOOD, 140, 1009 - 1010