Search results (149)
« Back to PublicationsLearning quality scores for chromatin accessibility bigWig tracks using Machine Learning
Preprint
Sanders E. et al, (2026)
CREP: Cis-Regulatory Element Predictor Based on Fine-Tuned Enformer
Preprint
Stranieri N. et al, (2026)
Expert-Guided Supervised Annotation of Erythroid Differentiation in Single-Cell RNA-seq
Preprint
Enderti A. et al, (2026)
Loop extrusion by cohesin plays a role in enhancer-activated gene expression early in differentiation.
Journal article
Stolper RJ. et al, (2026), Nat Commun
Deciphering cis-regulatory elements using REgulamentary.
Journal article
Riva SG. et al, (2026), Bioinform Adv, 6
Zone Equalisation Normalisation For Improved Alignment of Epigenetic Signal
Preprint
Wilson T. et al, (2025)
Platelets sequester extracellular DNA, capturing tumor-derived and free fetal DNA.
Journal article
Murphy L. et al, (2025), Science, 389
CREST-GV: Cell types Ranking and Enrichment Score for selecTive Genetic Variants
Preprint
Riva S. et al, (2025)
TRANCERs: Engineering enhancers into autonomous tissue-specific expression cassettes
Preprint
Barrow Molina E. et al, (2025)
REnformer, a single-cell ATAC-seq predicting model to investigate open chromatin sites
Preprint
Riva S. et al, (2025)
Modelling constant and cell-type specific CTCF sites by using Convolutional Neural Networks
Conference paper
Sanders E. et al, (2025), Proceedings of the International Joint Conference on Neural Networks
Single-cell technologies meet Hi-C.
Journal article
Hughes JR. and Davies JOJ., (2024), Nat Genet, 56, 1542 - 1543
Interspecies regulatory landscapes and elements revealed by novel joint systematic integration of human and mouse blood cell epigenomes.
Journal article
Xiang G. et al, (2024), bioRxiv