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The technique of single-strand conformation polymorphism (SSCP) was used to screen a series of 37 established colorectal cell lines, 22 fresh tumor samples, and 22 normal DNA samples for mutations in the beta 2-microglobulin gene. Exon 1 (including the leader peptide sequence) and exon 2 were screened separately. Six of 37 colorectal cell lines and 1 of 22 fresh tumors were shown to contain mutations, whereas no mutations were detected in the normal DNA samples. Sequencing of these mutations showed that an 8-bp CT repeat in the leader peptide sequence was particularly variable, since 3 of the cell lines and one fresh tumor sample have deletions in this region. In the related cell lines, DLD-1 and HCT-15, two similar mutations were identified, a C-->A substitution in codon 10 and a G-->T mutation in the splice sequence of intron 1. Expression of beta 2-microglobulin was examined using a series of monoclonal antibodies in an ELISA system. Reduced expression correlated with a mutation in one allele of beta 2-microglobulin, whereas loss of expression was seen in instances where a line was homozygous for a mutation or heterozygous for two mutations.

Original publication

DOI

10.1073/pnas.91.11.4751

Type

Journal article

Journal

Proc Natl Acad Sci U S A

Publication Date

24/05/1994

Volume

91

Pages

4751 - 4755

Keywords

Amino Acid Sequence, Base Sequence, Colorectal Neoplasms, DNA, Neoplasm, Exons, Humans, Molecular Sequence Data, Mutation, Polymerase Chain Reaction, Polymorphism, Genetic, Tumor Cells, Cultured, beta 2-Microglobulin